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=== Genomics === No known studies have identified ''Thermotoga naphthophila'' as [[pathogen]]ic.<ref name=":1" /> Takahata et al. observed the organism's sensitivity t ...

...making them particularly useful for tasks like gene annotation, functional genomics, and evolutionary studies. The breakthrough application in this field came Historically, computational genomics relied on statistical methods and [[Hidden Markov model|Hidden Markov Model ...

...De novo assembly using low-coverage short read sequence data from the rice pathogen Pseudomonas syringae pv. oryzae | journal = Genome Research | volume = 19 | ...r evolution analyses of the Pseudomonas aeruginosa species | journal = BMC Genomics | volume = 17 | issue = 45 | pages = 45 | date = January 2016 | pmid = 2675 ...

...isproportionately fail for plasmids and genomic Islands |journal=Microbial Genomics |volume=6 |issue=10 |pages=mgen000436 |doi=10.1099/mgen.0.000436 |doi-acces ...nd accurate taxonomic classification of metagenomic sequences |journal=BMC Genomics |date=December 2011 |volume=12 |issue=S3 |pages=S4 |doi=10.1186/1471-2164-1 ...

...ample, source attribution methods may be used to trace the origin of a new pathogen that recently [[Zoonosis|crossed from another host species]] into humans, o ...laboratory|reference laboratory]] and can identify specific strains of the pathogen at substantially higher precision than laboratory assays, such as [[ELISA|a ...

...>Miethke, M., Marahiel M. A., 2007. Siderophore-Based Iron Acquisition and Pathogen Control. Microbiol. Mol. Biol. Rev. 71:413-451. doi: 10.1128/MMBR.00012-07< ...of virulence factors of this organism.<ref>Cornelis P. 2008. Pseudomonas: Genomics and Molecular Biology (1st ed.). Caister Academic Press.</ref> It is hoped ...

...| doi = 10.1186/s13040-017-0155-3 | doi-access = free }}</ref> including [[genomics]], [[proteomics]], [[microarrays]], [[systems biology]], [[evolution]], and ...|doi= 10.1515/metgen-2016-0001 |arxiv=1510.06621|s2cid=17418188}}</ref> In genomics, a typical representation of a sequence is a vector of [[k-mer]]s frequenci ...

...between the secretor gene cluster and the DBP gene at 19q13.3 | journal = Genomics | volume = 54 | issue = 3 | pages = 484–93 | date = December 1998 | pmid = ...| title = Discovery of a new family of carbonic anhydrases in the malaria pathogen Plasmodium falciparum—the η-carbonic anhydrases | journal = Bioorganic & Me ...

Plants use pattern-recognition receptors to recognize [[pathogen]]s such as bacteria that cause plant diseases. This recognition triggers a === Genomics === ...

....</ref>{{rp|page=9}} Hungerford 1923 and Hungerford & Owens 1923 found the pathogen on cultivated [[barley]] in [[Central California|the central part of the st ...earch/search.aspx?orig_q=RN:42072639 |title=Induced Plant Mutations in the Genomics Era}}</ref>{{rp|30}} Studies of the Medfly invasion here show that there ha ...

*[[Pathogen|Germ]] theory of disease (''as a scientific theory''):<ref name=":37">{{Cit ...|first2=Rino |title=Reverse Vaccinology: Developing Vaccines in the Era of Genomics |journal=Immunity |date=October 2010 |volume=33 |issue=4 |pages=530–541 |do ...